biosample-enricher

User Guide

  • Installation
    • Prerequisites
    • Add to Your Project (Recommended)
    • From Source (Development)
  • Quick Start
  • Services
  • CLI Reference

API Reference

  • Services
    • Elevation Service
      • ElevationService
        • ElevationService.__init__()
        • ElevationService.from_env()
        • ElevationService.classify_coordinates()
        • ElevationService.classify_biosample_location()
        • ElevationService.select_providers()
        • ElevationService.get_elevation()
        • ElevationService.get_best_elevation()
        • ElevationService.create_output_envelope()
    • Soil Service
      • SoilService
        • SoilService.__init__()
        • SoilService.enrich_location()
        • SoilService.enrich_batch()
        • SoilService.enrich_biosample()
        • SoilService.get_provider_status()
    • Weather Service
      • WeatherService
        • WeatherService.__init__()
        • WeatherService.get_weather_for_biosample()
        • WeatherService.get_daily_weather()
        • WeatherService.get_provider_info()
    • Marine Service
      • MarineService
        • MarineService.__init__()
        • MarineService.get_marine_data_for_biosample()
        • MarineService.get_comprehensive_marine_data()
    • Land Service
      • LandService
        • LandService.__init__()
        • LandService.enrich_location()
        • LandService.enrich_batch()
        • LandService.enrich_biosample()
        • LandService.get_provider_status()
    • Forward Geocoding Service
      • ForwardGeocodingService
        • ForwardGeocodingService.__init__()
        • ForwardGeocodingService.get_available_providers()
        • ForwardGeocodingService.get_provider()
        • ForwardGeocodingService.get_provider_status()
        • ForwardGeocodingService.geocode()
        • ForwardGeocodingService.geocode_multiple()
        • ForwardGeocodingService.get_coordinates_for_place()
    • Reverse Geocoding Service
      • ReverseGeocodingService
        • ReverseGeocodingService.__init__()
        • ReverseGeocodingService.get_available_providers()
        • ReverseGeocodingService.get_provider()
        • ReverseGeocodingService.reverse_geocode()
        • ReverseGeocodingService.reverse_geocode_multiple()
        • ReverseGeocodingService.compare_providers()
    • OSM Features Service
      • OSMFeaturesService
        • OSMFeaturesService.__init__()
        • OSMFeaturesService.get_combined_features_for_location()
        • OSMFeaturesService.get_features_for_location()
        • OSMFeaturesService.enrich_biosample_location()
        • OSMFeaturesService.get_features_for_biosample()
        • OSMFeaturesService.get_provider_status()
        • OSMFeaturesService.batch_enrich_locations()
  • Models
  • Providers

Developer Guide

  • Contributing
  • Architecture
  • Testing
  • Provider Reliability

Project Info

  • Changelog
  • License
biosample-enricher
  • Overview: module code

All modules for which code is available

  • biosample_enricher.elevation.service
  • biosample_enricher.forward_geocoding.service
  • biosample_enricher.land.service
  • biosample_enricher.marine.service
  • biosample_enricher.osm_features.service
  • biosample_enricher.reverse_geocoding.service
  • biosample_enricher.soil.service
  • biosample_enricher.weather.service

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